The 12.x ohms secondary resistance sounds good. Of the 3 wires going to the coil, 1 is power and the other two are control wires from the DIS module.
I once had a problem this like this (I've had several stupid little "nothing" problems with the ignition system on this thing that give me headaches for weeks) and it turned out to be that I had forgotten to reattach ground going from the firewall to the intake manifold after I swapped the turbo in. So that's another thing to check.